Dual Topology: 2_3
Topological Aspects
- 2 Vertices
- Eigenvalues
- 0.0000000000
- 6.0000000000
Examples of actual RNAs corresponding to this structure from RNA databases: 61
PDB_Chain | Type | Discovery Method |
---|---|---|
1E95_A | RNA (5'-(*GP*CP*GP*GP*CP*CP*AP*GP*CP*UP*CP*CP*AP*G | SOLUTION NMR |
1KAJ_A | RNA PSEUDOKNOT APK | SOLUTION NMR |
1KPD_A | RNA PSEUDOKNOT APKA27G | SOLUTION NMR |
1KPY_A | P1-P2 FRAMESHIFTING PSEUDOKNOT | SOLUTION NMR |
1KPZ_A | P1-P2 frameshifting pseudoknot | SOLUTION NMR |
1L2X_A | RNA PSEUDOKNOT | X-RAY DIFFRACTION |
1L3D_A | RNA PSEUDOKNOT | X-RAY DIFFRACTION |
1RNK_A | RNA PSEUDOKNOT | SOLUTION NMR |
1YG3_A | ScYLV RNA pseudoknot | SOLUTION NMR |
1YG4_A | ScYLV RNA pseudoknot | SOLUTION NMR |
1YMO_A | TELOMERASE RNA P2B-P3 PSEUDOKNOT | SOLUTION NMR |
2A43_A | RNA Pseudoknot | X-RAY DIFFRACTION |
2AP0_A | C27A Sugarcane Yellow Leaf Virus RNA pseudoknot | SOLUTION NMR |
2AP5_A | C27A Sugarcane Yellow Leaf Virus RNA pseudoknot | SOLUTION NMR |
2G1W_A | 5'-R(*GP*GP*GP*GP*UP*GP*GP*CP*UP*CP*CP*CP*CP*UP*AP | SOLUTION NMR |
2K95_A | TELOMERASE RNA P2B-P3 PSEUDOKNOT | SOLUTION NMR |
2K96_A | TELOMERASE RNA P2B-P3 PSEUDOKNOT | SOLUTION NMR |
2L1V_A | 36-MER | SOLUTION NMR |
2M8K_A | RNA (48-MER) | SOLUTION NMR |
2RP0_A | PEMV-1 MRNA PSEUDOKNOT | SOLUTION NMR |
2RP1_A | PEMV-1 mRNA pseudoknot | SOLUTION NMR |
2TPK_A | RNA (MRNA PSEUDOKNOT) | SOLUTION NMR |
2XDB_G | TOXI | X-RAY DIFFRACTION |
3K1V_A | PREQ1 RIBOSWITCH | X-RAY DIFFRACTION |
437D_A | RNA PSEUDOKNOT | X-RAY DIFFRACTION |
4ATO_G | TOXI | X-RAY DIFFRACTION |
4V2S_Q | RYDC | X-RAY DIFFRACTION |
5KMZ_A | Telomerase RNA pseudoknot | SOLUTION NMR |
5NZ6_A | RNA (41-MER) | X-RAY DIFFRACTION |
6CAB_AB | RNA (5'-R(*(LCC)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP | X-RAY DIFFRACTION |
1HVU_I | RNA (33 NUCLEOTIDE RNA PSEUDOKNOT) | X-RAY DIFFRACTION |
1IBL_YZ | ANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNA | X-RAY DIFFRACTION |
2UU9_XY | RNA | X-RAY DIFFRACTION |
2UUA_XY | RNA | X-RAY DIFFRACTION |
2UUC_XY | RNA | X-RAY DIFFRACTION |
2XD0_H | TOXI | X-RAY DIFFRACTION |
2XDD_F | TOXI | X-RAY DIFFRACTION |
3FU2_B | PREQ1 RIBOSWITCH | X-RAY DIFFRACTION |
4B3M_ZW | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP | X-RAY DIFFRACTION |
4B3R_ZW | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP | X-RAY DIFFRACTION |
4B3T_ZW | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP | X-RAY DIFFRACTION |
4DR4_WV | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C) | X-RAY DIFFRACTION |
4DR5_WV | 5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C) | X-RAY DIFFRACTION |
4QJD_D | TWISTER RNA SEQUENCE | X-RAY DIFFRACTION |
4QJH_F | Twister Ribozyme | X-RAY DIFFRACTION |
4RMO_B | RNA (45-MER) | X-RAY DIFFRACTION |
4V83_CV | domain 3 of PSIC IGR IRES RNA | X-RAY DIFFRACTION |
4XEJ_AIRE | IRES RNA | X-RAY DIFFRACTION |
5KTJ_A | PISTOL (50-MER) | X-RAY DIFFRACTION |
5NWQ_A | GUANIDINE III RIBOSWITCH | X-RAY DIFFRACTION |
5NY8_A | RNA (41-MER) | X-RAY DIFFRACTION |
5NZ3_A | RNA (41-MER) | X-RAY DIFFRACTION |
5NZD_A | GUANIDINE III RIBOSWITCH | X-RAY DIFFRACTION |
5O62_A | RNA (41-MER) | X-RAY DIFFRACTION |
5O69_A | RNA (41-MER) | X-RAY DIFFRACTION |
5U4J_xz | P-site tRNA fMet | ELECTRON MICROSCOPY |
6CAO_WY | RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP* | X-RAY DIFFRACTION |
6CAP_WY | RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP* | X-RAY DIFFRACTION |
6CAQ_WY | RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP* | X-RAY DIFFRACTION |
6CAR_WY | RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP* | X-RAY DIFFRACTION |
6CAS_WY | RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP* | X-RAY DIFFRACTION |