RNA Structure

Dual Topology: 3_2


Topological Aspects

  • 3 Vertices


  • Eigenvalues
    • 0.0000000000
      1.2679492235
      4.7320508957


    Examples of actual RNAs corresponding to this structure from RNA databases: 18

    PDB_Chain Type Discovery Method
    4PKD_V U1 snRNA stem-loops 1 and 2 (55-MER)X-RAY DIFFRACTION
    5AXW_B RNA (73-MER)X-RAY DIFFRACTION
    5CZZ_B RNA (73-MER)X-RAY DIFFRACTION
    5OSG_2 18S RRNAELECTRON MICROSCOPY
    5XBL_B RNA (98-MER)X-RAY DIFFRACTION
    1M5K_B RNA HAIRPIN RIBOZYMEX-RAY DIFFRACTION
    1M5O_B RNA HAIRPIN RIBOZYMEX-RAY DIFFRACTION
    1M5P_B RNA HAIRPIN RIBOZYMEX-RAY DIFFRACTION
    1M5V_B RNA HAIRPIN RIBOZYMEX-RAY DIFFRACTION
    3IZZ_A Helix 5, 14, 15 (Small Subunit)ELECTRON MICROSCOPY
    3J0D_A ribosomal 23S RNAELECTRON MICROSCOPY
    3JCT_6 ITS2-1 miscRNAELECTRON MICROSCOPY
    5MPS_6 SACCHAROMYCES CEREVISIAE STRAIN T.52_2H CHROMOSOMEELECTRON MICROSCOPY
    5WSG_E Saccharomyces cerevisiae S288c SNR6 snRNAELECTRON MICROSCOPY
    5Y88_D U6 SNRNAELECTRON MICROSCOPY
    5YLZ_D U6 SNRNAELECTRON MICROSCOPY
    6ELZ_6 Internal transcribed spacer 2ELECTRON MICROSCOPY
    6EM1_6 5.8S ribosomal RNAELECTRON MICROSCOPY
Page | by Dr. Radut