Dual Topology: 3_5
![](../biomath/rag/dual_images2019/3_5.png)
Topological Aspects
- 3 Vertices
- Eigenvalues
- 0.0000000000
- 3.0000000000
- 3.0000000000
Examples of actual RNAs corresponding to this structure from RNA databases: 64
PDB_Chain | Type | Discovery Method |
---|---|---|
1NYI_BA | 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP | X-RAY DIFFRACTION |
1Q29_BA | Ribozyme | X-RAY DIFFRACTION |
1RMN_A | RNA (49-MER) | FLUORESCENCE TRANSFER |
299D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
2AKE_B | TRANSFER RNA-TRP | X-RAY DIFFRACTION |
2DLC_Y | T-RNA (76-MER) | X-RAY DIFFRACTION |
2DR2_B | TRANSFER RNA-TRP | X-RAY DIFFRACTION |
2FK6_R | TRNA(THR) | X-RAY DIFFRACTION |
2HOP_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
2MHI_A | Medaka telomerase RNA | SOLUTION NMR |
2MTJ_A | RNA (47-MER) | SOLUTION NMR |
2MTK_A | RNA (47-MER) | SOLUTION NMR |
2N7M_X | RNA (92-MER) | SOLUTION NMR |
300D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
301D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
359D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
379D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
3EGZ_B | Tetracycline aptamer and artificial riboswitch | X-RAY DIFFRACTION |
3MOJ_A | RNA (69-MER) | X-RAY DIFFRACTION |
3QSY_D | TRNA | X-RAY DIFFRACTION |
488D_BAC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
4KZ2_BAC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
4WC2_B | RNA 75-MER | X-RAY DIFFRACTION |
4WC3_B | RNA 76-MER | X-RAY DIFFRACTION |
4WC4_B | RNA (74-MER) | X-RAY DIFFRACTION |
4WC5_B | RNA (74-MER) | X-RAY DIFFRACTION |
4WC6_B | RNA (75-MER) | X-RAY DIFFRACTION |
4WC7_B | RNA (75-MER) | X-RAY DIFFRACTION |
4X0B_B | RNA (77-MER) | X-RAY DIFFRACTION |
5X6B_P | TRNACYS | X-RAY DIFFRACTION |
1MME_DC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
2CZJ_H | tmRNA (63-MER) | X-RAY DIFFRACTION |
2QUS_A | HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
3J0L_W | TRNA | ELECTRON MICROSCOPY |
3J0O_W | TRNA | ELECTRON MICROSCOPY |
3J46_p | P-tRNA | ELECTRON MICROSCOPY |
3J7R_S6 | P/E tRNA | ELECTRON MICROSCOPY |
3JBP_7 | E-tRNA | ELECTRON MICROSCOPY |
3JBU_v | glycine-tRNA | ELECTRON MICROSCOPY |
3WFQ_B | RNA (73-MER) | X-RAY DIFFRACTION |
4O26_E | Telomerase TR | X-RAY DIFFRACTION |
4UG0_S6 | HUMAN INITIATOR MET-TRNA-I | ELECTRON MICROSCOPY |
4V5S_AY | A-SITE TRNA G24A TRP-TRNA TRP | X-RAY DIFFRACTION |
4V61_BB | 5S rRNA | ELECTRON MICROSCOPY |
4V6T_AX | formyl-methionine specific initiator transfer RNA | ELECTRON MICROSCOPY |
4V7M_AY | tRNA-Gln | X-RAY DIFFRACTION |
4V8O_AV | PE HYBRID STATE TRNA FMET | X-RAY DIFFRACTION |
4V9I_AW | E-SITE tRNA | X-RAY DIFFRACTION |
5B63_D | TRNA-ARG | X-RAY DIFFRACTION |
5DDO_A | L-glutamine riboswitch (58-MER) | X-RAY DIFFRACTION |
5DDP_A | RNA (61-MER) | X-RAY DIFFRACTION |
5DDQ_A | L-GLUTAMINE RIBOSWITCH RNA (61-MER) | X-RAY DIFFRACTION |
5DDR_B | L-GLUTAMINE RIBOSWITCH RNA (61-MER) | X-RAY DIFFRACTION |
5E81_1K | tRNA-Lys | X-RAY DIFFRACTION |
5IB8_3L | tRNALys | X-RAY DIFFRACTION |
5IMQ_4 | P- site tRNA | ELECTRON MICROSCOPY |
5KCR_1x | P-site tRNA | ELECTRON MICROSCOPY |
5L3P_y | deacylated A/R-tRNA | ELECTRON MICROSCOPY |
5NP6_B | P-site tRNA-Gly | ELECTRON MICROSCOPY |
5T7V_D | E-site tRNA | ELECTRON MICROSCOPY |
5ZLU_DD | P-site tRNA | ELECTRON MICROSCOPY |
6AZ1_4 | E-SITE TRNA | ELECTRON MICROSCOPY |
6BOH_NC | tRNA | X-RAY DIFFRACTION |
6GSJ_3L | tRNAThr | X-RAY DIFFRACTION |