Dual Topology: 3_5
Topological Aspects
- 3 Vertices
- Eigenvalues
- 0.0000000000
- 3.0000000000
- 3.0000000000
Examples of actual RNAs corresponding to this structure from RNA databases: 64
| PDB_Chain | Type | Discovery Method |
|---|---|---|
| 1NYI_BA | 5'-R(*GP*CP*CP*GP*AP*AP*AP*CP*UP*CP*GP*UP*AP*AP*GP | X-RAY DIFFRACTION |
| 1Q29_BA | Ribozyme | X-RAY DIFFRACTION |
| 1RMN_A | RNA (49-MER) | FLUORESCENCE TRANSFER |
| 299D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 2AKE_B | TRANSFER RNA-TRP | X-RAY DIFFRACTION |
| 2DLC_Y | T-RNA (76-MER) | X-RAY DIFFRACTION |
| 2DR2_B | TRANSFER RNA-TRP | X-RAY DIFFRACTION |
| 2FK6_R | TRNA(THR) | X-RAY DIFFRACTION |
| 2HOP_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2MHI_A | Medaka telomerase RNA | SOLUTION NMR |
| 2MTJ_A | RNA (47-MER) | SOLUTION NMR |
| 2MTK_A | RNA (47-MER) | SOLUTION NMR |
| 2N7M_X | RNA (92-MER) | SOLUTION NMR |
| 300D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 301D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 359D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 379D_BA | RNA HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 3EGZ_B | Tetracycline aptamer and artificial riboswitch | X-RAY DIFFRACTION |
| 3MOJ_A | RNA (69-MER) | X-RAY DIFFRACTION |
| 3QSY_D | TRNA | X-RAY DIFFRACTION |
| 488D_BAC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
| 4KZ2_BAC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
| 4WC2_B | RNA 75-MER | X-RAY DIFFRACTION |
| 4WC3_B | RNA 76-MER | X-RAY DIFFRACTION |
| 4WC4_B | RNA (74-MER) | X-RAY DIFFRACTION |
| 4WC5_B | RNA (74-MER) | X-RAY DIFFRACTION |
| 4WC6_B | RNA (75-MER) | X-RAY DIFFRACTION |
| 4WC7_B | RNA (75-MER) | X-RAY DIFFRACTION |
| 4X0B_B | RNA (77-MER) | X-RAY DIFFRACTION |
| 5X6B_P | TRNACYS | X-RAY DIFFRACTION |
| 1MME_DC | RNA RIBOZYME STRAND | X-RAY DIFFRACTION |
| 2CZJ_H | tmRNA (63-MER) | X-RAY DIFFRACTION |
| 2QUS_A | HAMMERHEAD RIBOZYME | X-RAY DIFFRACTION |
| 3J0L_W | TRNA | ELECTRON MICROSCOPY |
| 3J0O_W | TRNA | ELECTRON MICROSCOPY |
| 3J46_p | P-tRNA | ELECTRON MICROSCOPY |
| 3J7R_S6 | P/E tRNA | ELECTRON MICROSCOPY |
| 3JBP_7 | E-tRNA | ELECTRON MICROSCOPY |
| 3JBU_v | glycine-tRNA | ELECTRON MICROSCOPY |
| 3WFQ_B | RNA (73-MER) | X-RAY DIFFRACTION |
| 4O26_E | Telomerase TR | X-RAY DIFFRACTION |
| 4UG0_S6 | HUMAN INITIATOR MET-TRNA-I | ELECTRON MICROSCOPY |
| 4V5S_AY | A-SITE TRNA G24A TRP-TRNA TRP | X-RAY DIFFRACTION |
| 4V61_BB | 5S rRNA | ELECTRON MICROSCOPY |
| 4V6T_AX | formyl-methionine specific initiator transfer RNA | ELECTRON MICROSCOPY |
| 4V7M_AY | tRNA-Gln | X-RAY DIFFRACTION |
| 4V8O_AV | PE HYBRID STATE TRNA FMET | X-RAY DIFFRACTION |
| 4V9I_AW | E-SITE tRNA | X-RAY DIFFRACTION |
| 5B63_D | TRNA-ARG | X-RAY DIFFRACTION |
| 5DDO_A | L-glutamine riboswitch (58-MER) | X-RAY DIFFRACTION |
| 5DDP_A | RNA (61-MER) | X-RAY DIFFRACTION |
| 5DDQ_A | L-GLUTAMINE RIBOSWITCH RNA (61-MER) | X-RAY DIFFRACTION |
| 5DDR_B | L-GLUTAMINE RIBOSWITCH RNA (61-MER) | X-RAY DIFFRACTION |
| 5E81_1K | tRNA-Lys | X-RAY DIFFRACTION |
| 5IB8_3L | tRNALys | X-RAY DIFFRACTION |
| 5IMQ_4 | P- site tRNA | ELECTRON MICROSCOPY |
| 5KCR_1x | P-site tRNA | ELECTRON MICROSCOPY |
| 5L3P_y | deacylated A/R-tRNA | ELECTRON MICROSCOPY |
| 5NP6_B | P-site tRNA-Gly | ELECTRON MICROSCOPY |
| 5T7V_D | E-site tRNA | ELECTRON MICROSCOPY |
| 5ZLU_DD | P-site tRNA | ELECTRON MICROSCOPY |
| 6AZ1_4 | E-SITE TRNA | ELECTRON MICROSCOPY |
| 6BOH_NC | tRNA | X-RAY DIFFRACTION |
| 6GSJ_3L | tRNAThr | X-RAY DIFFRACTION |