Dual Topology: 3_8
Topological Aspects
- 3 Vertices
- Eigenvalues
- 0.0000000000
- 4.0000000000
- 6.0000000000
Examples of actual RNAs corresponding to this structure from RNA databases: 31
| PDB_Chain | Type | Discovery Method |
|---|---|---|
| 1BAU_AB | SL1 RNA DIMER | SOLUTION NMR |
| 1BJ2_AB | RNA (5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*AP*UP*GP*GP*UP* | SOLUTION NMR |
| 1XP7_AB | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP | X-RAY DIFFRACTION |
| 1XPE_AB | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP | X-RAY DIFFRACTION |
| 1XPF_AB | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP | X-RAY DIFFRACTION |
| 1Y3O_AB | 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*A | X-RAY DIFFRACTION |
| 1Y3S_AB | 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*A | X-RAY DIFFRACTION |
| 1YXP_AB | 5'-R(*CP*UP*(5BU)P*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*A | X-RAY DIFFRACTION |
| 2B8R_AB | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP | X-RAY DIFFRACTION |
| 2B8S_AB | 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP | X-RAY DIFFRACTION |
| 2BJ2_AB | RNA (5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*AP*UP*GP*GP*UP* | SOLUTION NMR |
| 2D19_BA | 5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP | SOLUTION NMR |
| 2F4X_AB | 5'-R(P*GP*GP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*G | SOLUTION NMR |
| 2FCX_AB | HIV-1 DIS RNA | X-RAY DIFFRACTION |
| 2FCY_AB | HIV-1 DIS RNA | X-RAY DIFFRACTION |
| 2FD0_AB | HIV-1 DIS RNA | X-RAY DIFFRACTION |
| 2LC8_A | RNA (56-MER) | SOLUTION NMR |
| 2NUG_EFCD | 5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3' | X-RAY DIFFRACTION |
| 2PN9_AB | 5'-R(*GP*GP*AP*GP*CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP | SOLUTION NMR |
| 1DDY_C | VITAMIN B12 BINDING RNA | X-RAY DIFFRACTION |
| 1ET4_A | RNA APTAMER, 35-MER | X-RAY DIFFRACTION |
| 1ZCI_AB | 5'-R(*CP*(5BU)P*UP*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*A | X-RAY DIFFRACTION |
| 2FCZ_AB | HIV-1 DIS RNA | X-RAY DIFFRACTION |
| 2QWY_C | SAM-II riboswitch | X-RAY DIFFRACTION |
| 3OL7_JNKOLP | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP* | X-RAY DIFFRACTION |
| 3OL8_JNKOLP | RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP* | X-RAY DIFFRACTION |
| 3PLA_GHIJ | C/D guide RNA | X-RAY DIFFRACTION |
| 4V84_AV | RNA (34-MER) | X-RAY DIFFRACTION |
| 5GIN_GHIJ | C/D guide RNA | X-RAY DIFFRACTION |
| 5GIO_GHIJ | C/D guide RNA | X-RAY DIFFRACTION |
| 5GIP_GHIJ | C/D guide RNA | X-RAY DIFFRACTION |