RNA Structure

Dual Topology: 4_14


Topological Aspects

  • 4 Vertices


  • Eigenvalues
    • 0.0000000000
      1.1715729237
      4.0000000000
      6.8284273148


    Examples of actual RNAs corresponding to this structure from RNA databases: 37

    PDB_Chain Type Discovery Method
    1KXK_A ai5g group II Self-splicing intronX-RAY DIFFRACTION
    1P5O_A 77-MERSOLUTION NMR
    1P5P_A 77-MERSOLUTION NMR
    1XJR_A s2m RNAX-RAY DIFFRACTION
    3U4M_B RNA (80-MER)X-RAY DIFFRACTION
    3U56_B RNA (80-MER)X-RAY DIFFRACTION
    3UMY_B RNA (80-MER)X-RAY DIFFRACTION
    4ERD_CD 5'-R(P*GP*GP*UP*CP*GP*AP*CP*AP*UP*CP*UP*UP*CP*GP*GX-RAY DIFFRACTION
    4KZD_R RNA (84-MER)X-RAY DIFFRACTION
    4KZE_R RNA (84-MER)X-RAY DIFFRACTION
    4N0T_B U6 SNRNAX-RAY DIFFRACTION
    4Q9Q_R SPINACH RNA APTAMERX-RAY DIFFRACTION
    4Q9R_R SPINACH RNA APTAMERX-RAY DIFFRACTION
    4QG3_B FRAGMENT OF 23S RRNAX-RAY DIFFRACTION
    4QVI_B fragment of 23S rRNAX-RAY DIFFRACTION
    5IEM_A RNA (57-MER)SOLUTION NMR
    5NPM_B 23S RIBOSOMAL RNAX-RAY DIFFRACTION
    5UNE_AB RNA (47-MER)X-RAY DIFFRACTION
    6B14_R RNA (86-MER)X-RAY DIFFRACTION
    6B3K_R RNA (83-MER),RNA (83-MER)X-RAY DIFFRACTION
    1D4R_BA 29-MER OF MODIFIED SRP RNA HELIX 6X-RAY DIFFRACTION
    2J28_8 4.5S SIGNAL RECOGNITION PARTICLE RNAELECTRON MICROSCOPY
    3J45_5 23S RIBOSOMAL RNAELECTRON MICROSCOPY
    3J45_4 23S ribosomal RNAELECTRON MICROSCOPY
    3JB9_C U5 snRNAELECTRON MICROSCOPY
    3RW6_H constitutive transport element(CTE)of Mason-PfizerX-RAY DIFFRACTION
    3SIV_CF U4atac snRNAX-RAY DIFFRACTION
    4MGN_A glyQS T box riboswitchX-RAY DIFFRACTION
    4V61_BC 4.8S rRNAELECTRON MICROSCOPY
    4V8Y_CN EUKARYOTIC RIBOSOMAL L1_RRNAELECTRON MICROSCOPY
    5AKA_7 4.5S ribosomal RNAELECTRON MICROSCOPY
    5DCV_D RNA (47-MER)X-RAY DIFFRACTION
    5LI0_B 5S ribosomal RNAELECTRON MICROSCOPY
    5LYS_B 7SK RNAX-RAY DIFFRACTION
    5LYU_B 7SK RNAX-RAY DIFFRACTION
    5LYV_B RNA (57-MER)X-RAY DIFFRACTION
    5XTM_D RNA (47-MER)X-RAY DIFFRACTION
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