Dual Topology: 4_16
![](../biomath/rag/dual_images2019/4_16.png)
Topological Aspects
- 4 Vertices
- Eigenvalues
- 0.0000000000
- 1.4384472370
- 3.0000000000
- 5.5615530014
Examples of actual RNAs corresponding to this structure from RNA databases: 42
PDB_Chain | Type | Discovery Method |
---|---|---|
1DK1_B | RRNA FRAGMENT | X-RAY DIFFRACTION |
1F7Y_B | 16S RIBOSOMAL RNA FRAGMENT | X-RAY DIFFRACTION |
1OLN_C | RNA | THEORETICAL MODEL |
2HGH_B | 55-MER | SOLUTION NMR |
2JQ7_B | RIBOSOMAL RNA | SOLUTION NMR |
2LU0_A | RNA (49-MER) | SOLUTION NMR |
2NC1_A | IRES RNA (67-MER) | SOLUTION NMR |
3E5C_A | SMK box (SAM-III) Riboswitch | X-RAY DIFFRACTION |
3E5E_A | SMK BOX (SAM-III) RIBOSWITCH FOR RNA | X-RAY DIFFRACTION |
3E5F_A | SMK BOX (SAM-III) RIBOSWITCH FOR RNA | X-RAY DIFFRACTION |
3R4F_A | pRNA | X-RAY DIFFRACTION |
4NYG_A | THIM TPP RIBOSWITCH | X-RAY DIFFRACTION |
5G2Y_A | GROUP II INTRON | ELECTRON MICROSCOPY |
1C04_E | 23S RRNA FRAGMENT | X-RAY DIFFRACTION |
1FOQ_B | BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY |
1HC8_C | 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN | X-RAY DIFFRACTION |
1J2B_C | tRNA(Val) | X-RAY DIFFRACTION |
1MMS_C | 23S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1QA6_C | 58 NUCLEOTIDE RIBOSOMAL RNA DOMAIN | X-RAY DIFFRACTION |
1UN6_F | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1Y39_C | 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN | X-RAY DIFFRACTION |
2WWB_D | 5.8S RRNA | ELECTRON MICROSCOPY |
3DEG_G | 50S RNA helix 42-44 | ELECTRON MICROSCOPY |
3G4S_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
3JCS_5 | 26S epsilon ribosomal RNA | ELECTRON MICROSCOPY |
3PIO_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4V4G_BA | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4V4V_B9 | 5S ribosomal RNA | ELECTRON MICROSCOPY |
4V7C_BB | 5S ribosomal RNA | ELECTRON MICROSCOPY |
4V7D_AB | 5S ribosomal RNA | ELECTRON MICROSCOPY |
4V7L_AW | tRNA-Gln | X-RAY DIFFRACTION |
5E7K_3L | tRNALys | X-RAY DIFFRACTION |
5FL8_z | 5S ribosomal RNA | ELECTRON MICROSCOPY |
5GM6_D | Saccharomyces cerevisiae strain CDRDR_sf_H chromos | ELECTRON MICROSCOPY |
5GMK_D | U5 SNRNA | ELECTRON MICROSCOPY |
5JCS_z | 5S ribosomal RNA | ELECTRON MICROSCOPY |
5LKS_L7 | 5S ribosomal RNA | ELECTRON MICROSCOPY |
5TZS_2 | U3 snoRNA | ELECTRON MICROSCOPY |
5WSG_D | U5 SNRNA | ELECTRON MICROSCOPY |
5Y88_B | U5 SNRNA | ELECTRON MICROSCOPY |
5YLZ_B | U5 SNRNA | ELECTRON MICROSCOPY |
6BK8_5 | U5 SNRNA | ELECTRON MICROSCOPY |