RNA Structure

Dual Topology: 5_2

Topological Aspects

  • 5 Vertices


  • Eigenvalues
      • 0.0000000000
      1.3819659948
      1.3819659948
      3.6180338860
      3.6180338860


    Examples of actual RNAs corresponding to this structure from RNA databases: 40

    PDB_Chain Type Discovery Method
    1H3E_B WILD-TYPE TRNATYR(GUA)X-RAY DIFFRACTION
    2NQP_F TRANSFER RNAX-RAY DIFFRACTION
    3A3A_A selenocysteine tRNAX-RAY DIFFRACTION
    3AM1_B ASL-truncated tRNAX-RAY DIFFRACTION
    3J5Y_D TRNA-LEU ELECTRON MICROSCOPY
    3W3S_B selenocysteine tRNAX-RAY DIFFRACTION
    3ZJV_B TRNALEU5 UAA ISOACCEPTORX-RAY DIFFRACTION
    4AS1_B TRNA-LEU5 (UAA ISOACEPTOR)X-RAY DIFFRACTION
    4ZDO_E SELENOCYSTEINE TRNAX-RAY DIFFRACTION
    4ZDP_E SELENOCYSTEINE TRNAX-RAY DIFFRACTION
    1WZ2_D tRNAX-RAY DIFFRACTION
    2BTE_B TRNALEU TRANSCRIPT WITH ANTICODON CAG X-RAY DIFFRACTION
    2BYT_B TRNALEU TRANSCRIPT WITH ANTICODON CAG X-RAY DIFFRACTION
    2NR0_E leucyl tRNAX-RAY DIFFRACTION
    2V0G_B TRNALEU X-RAY DIFFRACTION
    3ADB_D SELENOCYSTEINE TRNAX-RAY DIFFRACTION
    3ADC_D SELENOCYSTEINE TRNAX-RAY DIFFRACTION
    3ADD_C selenocysteine tRNAX-RAY DIFFRACTION
    3RG5_B tRNA(Sec)X-RAY DIFFRACTION
    3W1K_F SELENOCYSTEINE TRNAX-RAY DIFFRACTION
    3ZGZ_B TRNA-LEU UAA ISOACCEPTORX-RAY DIFFRACTION
    4AQ7_B E. COLI TRNALEU UAA ISOACCEPTORX-RAY DIFFRACTION
    4CQN_B ESCHERICHIA COLI TRNA-LEU UAA ISOACCEPTORX-RAY DIFFRACTION
    4V87_BB TRNA-LEUX-RAY DIFFRACTION
    4V8C_CB TRNA-LEUX-RAY DIFFRACTION
    4V8D_CD TRNA-TYRX-RAY DIFFRACTION
    4V8E_BD TRNA-TYRX-RAY DIFFRACTION
    4V8F_CD TRNA-TYRX-RAY DIFFRACTION
    4WZD_3K tRNA-TyrX-RAY DIFFRACTION
    5AH5_D TRNA-LEU TAA ISOACCEPTORX-RAY DIFFRACTION
    5LZB_y Sec-tRNASecELECTRON MICROSCOPY
    5LZC_y Sec-tRNASecELECTRON MICROSCOPY
    5LZD_y Sec-tRNASecELECTRON MICROSCOPY
    5LZF_y Sec-tRNASecELECTRON MICROSCOPY
    5OMW_B L-LEUCYL-TRNAX-RAY DIFFRACTION
    5ON2_B TRNA(LEU)X-RAY DIFFRACTION
    5ON3_B TRNA(LEU)X-RAY DIFFRACTION
    5ONH_E L-LEUCYL-TRNA(LEU)X-RAY DIFFRACTION
    6D9J_3 P-site tRNAELECTRON MICROSCOPY
    6HA1_x P-tRNAELECTRON MICROSCOPY
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