Dual Topology: 5_32
Topological Aspects
- 5 Vertices
- Eigenvalues
- 0.0000000000
- 1.0000000000
- 2.0000000000
- 5.0000000000
- 6.0000000000
Examples of actual RNAs corresponding to this structure from RNA databases: 49
| PDB_Chain | Type | Discovery Method |
|---|---|---|
| 2HOJ_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2HOK_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2HOL_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2HOM_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2HOO_A | THI-BOX RIBOSWITCH | X-RAY DIFFRACTION |
| 2N3Q_A | RNA (62-MER) | SOLUTION NMR |
| 2N3R_A | RNA (62-MER) | SOLUTION NMR |
| 3MUT_R | G20A/C92U MUTANT C-DI-GMP RIBOSWITCH | X-RAY DIFFRACTION |
| 4NYB_A | THIM TPP RIBOSWITCH | X-RAY DIFFRACTION |
| 4NYC_A | THIM TPP RIBOSWITCH | X-RAY DIFFRACTION |
| 4NYD_A | THIM TPP RIBOSWITCH | X-RAY DIFFRACTION |
| 5D6G_0 | 23S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 5D8H_A | 23S ribosomal RNA | X-RAY DIFFRACTION |
| 1YSH_B | RNA (101-MER) | ELECTRON MICROSCOPY |
| 2CKY_A | NUCLEIC ACID | X-RAY DIFFRACTION |
| 2GDI_X | TPP RIBOSWITCH | X-RAY DIFFRACTION |
| 2QA4_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 3CCJ_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 3CCR_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 3CCS_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 3D2G_A | TPP-SPECIFIC RIBOSWITCH | X-RAY DIFFRACTION |
| 3D2V_A | TPP-specific riboswitch | X-RAY DIFFRACTION |
| 3D2X_A | TPP-SPECIFIC RIBOSWITCH | X-RAY DIFFRACTION |
| 3J3V_B | RIBOSOME RNA 5S | ELECTRON MICROSCOPY |
| 3JCE_B | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 3K0J_E | RNA (87-MER) | X-RAY DIFFRACTION |
| 3PIP_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 4NYA_A | THIM TPP RIBOSWITCH | X-RAY DIFFRACTION |
| 4V4N_A3 | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 4V5B_CA | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 4V6U_B3 | 5S rRNA | ELECTRON MICROSCOPY |
| 4V84_BB | 5S ribosomal RNA | X-RAY DIFFRACTION |
| 4V8O_BB | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
| 5DAR_A | 74 NT FRAGMENT OF 23S RRNA | X-RAY DIFFRACTION |
| 5LJ3_U | U5 SNRNA (SMALL NUCLEAR RNA) | ELECTRON MICROSCOPY |
| 5LJ5_U | U5 SNRNA (SMALL NUCLEAR RNA) | ELECTRON MICROSCOPY |
| 5LQW_5 | U5 SNRNA | ELECTRON MICROSCOPY |
| 5MMI_B | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 5MMM_B | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 5MPS_5 | U5 SNRNA | ELECTRON MICROSCOPY |
| 5MQ0_5 | SACCHAROMYCES CEREVISIAE STRAIN WI_C_MBSP_4 CHROMO | ELECTRON MICROSCOPY |
| 5NGM_AB | 5S Ribosomal RNA | ELECTRON MICROSCOPY |
| 5NJT_V | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 5O60_B | 5S RRNA | ELECTRON MICROSCOPY |
| 5O61_B | 5S rRNA | ELECTRON MICROSCOPY |
| 5XXB_3 | 5S RNA | ELECTRON MICROSCOPY |
| 5XYM_B | 5S RNA | ELECTRON MICROSCOPY |
| 6ERI_Ax | 5S ribosomal RNA | ELECTRON MICROSCOPY |
| 6FXC_AB | 5S ribosomal RNA | ELECTRON MICROSCOPY |