Tree Topology: 7_7
![](../biomath/rag/tree_images2019/7_7.png)
Topological Aspects
- 7 Vertices
- Eigenvalues 0.0000000000
0.3819660246
0.6086176038
1.0000000000
2.2271344662
2.6180338860
5.1642479897
Examples of actual RNAs corresponding to this structure from RNA databases: 28
PDB_Chain | Type | Discovery Method |
---|---|---|
2GIS_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
2YDH_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
3GX2_A | RNA (94-MER) | X-RAY DIFFRACTION |
3GX3_A | RNA (94-MER) | X-RAY DIFFRACTION |
3GX5_A | RNA (94-MER) | X-RAY DIFFRACTION |
3IQN_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
3IQR_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
3V7E_C | SAM-I riboswitch aptamer with an engineered helix | X-RAY DIFFRACTION |
4AOB_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
4B5R_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
4L81_A | SAM-I/IV variant riboswitch aptamer domain | X-RAY DIFFRACTION |
4Y1I_A | Lactococcus lactis yybP-ykoY riboswitch | X-RAY DIFFRACTION |
5FJC_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK1_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK2_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK3_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK4_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK5_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FK6_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FKD_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FKE_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FKF_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FKG_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5FKH_A | SAM-I RIBOSWITCH | X-RAY DIFFRACTION |
5IT7_4 | cricket paralysis virus IRES | ELECTRON MICROSCOPY |
5IT9_i | Cricket paralysis virus IRES RNA | ELECTRON MICROSCOPY |
6CB3_A | RNA (99-MER) | X-RAY DIFFRACTION |
6D9J_4 | CrPV IRES | ELECTRON MICROSCOPY |