Tree Topology: 8_3
![](../biomath/rag/tree_images2019/8_3.png)
Topological Aspects
- 8 Vertices
- Eigenvalues 0.0000000000
0.1863934994
0.5857864618
1.0000000000
2.0000000000
2.4706833363
3.4142136574
4.3429231644
Examples of actual RNAs corresponding to this structure from RNA databases: 32
PDB_Chain | Type | Discovery Method |
---|---|---|
1NKW_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1NWX_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1NWY_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1SM1_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
1XBP_9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
2LKR_A | RNA (111-MER) | SOLUTION NMR |
2ZJP_Z | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
2ZJQ_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
2ZJR_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
3CF5_Z | RRNA-5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
3FWO_B | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
3JCS_3 | 26S gamma ribosomal RNA | ELECTRON MICROSCOPY |
3JQ4_B | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4IOA_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4IOC_Y | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4LSK_YB | 5S rRNA | X-RAY DIFFRACTION |
4UYK_R | SRP RNA | X-RAY DIFFRACTION |
4V49_B9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4V4A_B9 | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4V7P_BB | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
4V9N_DB | 5S RIBOSOMAL RNA | X-RAY DIFFRACTION |
5DM6_Y | 5S ribosomal RNA | X-RAY DIFFRACTION |
5KCS_1B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
5L3P_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
5NP6_Z | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
5UYN_02 | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
5WFS_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
6GWT_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
6GXM_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
6GXN_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
6GXO_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |
6GXP_B | 5S RIBOSOMAL RNA | ELECTRON MICROSCOPY |