- ViewModel
ViewModel builds and visualizes (in
MATLAB) a geometric surface of a macromolecule, with colored spheres representing charges on
the surface. The color of a sphere indicates the value of a charge.
1. Application in DiSCO 1.2
2. Requirements:
--
MATLAB 5.3 or higher
-- macromolecule's coordinate file
-- charges' coodinate file
-- charges'
value file
3. Manual
4. Download ViewModel-1.2.tar (389 kb) or ViewModel-1.2.zip (135 kb) [Back to Top]
5. Citation: Zhang, Q., Beard, D. A., Schlick, T., Constructing irregular surfaces to enclose macromolecular complexes for mesoscale modeling using the discrete surface charge optimization (DiSCO) algorithm.
Journal of Computational Chemistry 24: 2063-2074, 2003.
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Last updated on: 06.22.2004